Section outline

  • Lecture N. 5 TUE OCT 5 2023 room 8 12am-2pm

    biological physics/physical biology; biologically inspired physics/biophysics

    evolutionary distances (slides CB_22_23_L4.pdf, integrate with further self-study)

    genomes and the genetic code: Central dogma of molecular biology, informational biomolecules: nucleic acids & proteins: peptide bonds formation and planarity, protein synthesis on the ribosome, genetic code and its degeneration (codon bias) (HA 2.2, 2.3)

    what is darwinian evolution (HA 3.1,3.2, 3.3 (mutations), 3.4 (coalescence) 3.6 (neutral evolution and adaptation, codon bias))

    the space of biological sequences as the archive of evolution (molecules as documents of evolutionary history, see: ZuckerkandlPauling1965

    molecular evolution of nucleotide sequences

    essential genes, homologous/paralogous genes

    evolutionary distances d vs. sequence identity D

    sequence/structure/dynamics/function


    • Find here materials to complement the track of this lectureN.4: In particular the introductory chapter of Weinberg's treatise on Cancer and the interesting paper Physics is life by Goldenfeld and Woese.